Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891443.1_cds_XP_016446232.1_41110
CDS Infomation

[gene=LOC107771391] [db_xref=GeneID:107771391] [protein=protein argonaute 1-like] [protein_id=XP_016446232.1] [location=join(185069..185842,185954..186162,186241..186390,186515..186648,186768..186877,187059..187165,187339..187477,187559..187675,188729..188836,189001..189072,189443..189565,189649..189814,189900..190159,190237..190379,190564..190626,190717..190780,190906..191041,191170..191243,191325..191419,191510..191541,191682..191902)] [gbkey=CDS]
Sequence

ATGGTGCGGAAGAGGAGAACTGAGTTACCTGGTTCTGGTGAGAGCTCTGGGTCTCAAGAA
ACTGGAGGACAGGGTCGTGGCCAGCATCCACAGCTGCTGCAGCAACAACAAGGCGGCTAC
CAAGGTGCTCAAGAAACTGGAGCACAGAGTCGTGGCCAGCGTCCACAGCAGCAACAACAA
GGCAGCTACCAAGGTGGAGGAAGAGGTTGGAGGCCGCAGCAGGGAGGATATGGTGGCCGT
GGTGCTGGTGGACCTCCACGTGGTGGAATGGCCCCTCAACAATCATATGGTGGAATGGCC
CCTCAACAGTCATATGGTGGACAACCTGAATACTATCAGCAGGGCAGGGGGGCTCAGCAG
CATCAACGAGGCGGAGGACCACCCCAGCAACATGGTGGCATAGGTGGCCGTGGGGCACCT
TCTGGTGGGCCTTCTAGGCCACCAGCACCCGAGCTGCACCAAGCTACCTCCCAGACTCCA
TATCAAGCTGCAATGACTACTCAGCCTATACCTTATGTAAGACCAACTGAAACATCCTCT
GAAGCTGGTTCCTCATCTCAGCCACCTGAGCAGGCAGCTCTACAAGTGACACAACAGTTC
CAGCAACTTGCTTTGCAGCAAGAAGCGGCTCCAACGCAAGCAGTTCCACCTGCATCAAGC
AAATCACTACGGTTTCCCCTGCGTCCAGGGAAGGGGAGCAATGGTATGAGATGCATAGTC
AAAGCCAATCACTTCTTTGCAGAGCTGCCTGACAAAGACTTGCACCAGTATGATGTCACA
ATTTCTCCAGAGGTGCCATCACGTGGCGTCAACCGTGCTGTCATGGCGCAGCTGGTGAAG
CTGTACCAAGAATCTCATCTTGGGAAGAGACTTCCAGCATATGATGGAAGGAAAAGTCTA
TACACTGCAGGGCCCCTTCCATTTGTTCAAAAAGACTTCAAAATAACTCTTATTGATGAT
GAGGATGGGCCTGGTGGTGCTAGAAGGGAAAGGGAATTTAAAGTTGTGATCAAATTGGCT
GCCCGTGCTGATCTTCATCACTTGGGAATGTTTTTAGAAGGGAAGCAGGCTGATGCACCT
CAAGAGGCGCTTCAAGTTCTGGATATTGTTCTGCGTGAGTTGCCAACATCTAGGTTTTGT
CCTGTGGGTCGTTCTTTCTATTCCCCTGATTTAGGGCGAAGACAACCATTGGGTGAAGGT
TTAGAGAGTTGGCGTGGGTTCTATCAAAGCATTCGCCCCACACAAATGGGCTTATCACTG
AACATCGATATGTCTTCCACTGCATTCATTGAGCCACTGCCAGTCATTAATTTTGTGACA
CAGCTTCTGAACCGAGATGTGTCATCTAGACCACTGTCTGATGCTGACCGTGTAAAGATC
AAAAAAGCTCTGAGAGGTGTGAAGGTGGAGGTTACTCATCGTGGAAATATGCGGAGGAAG
TACCGCATTTCGGGTTTAACATCTCAAGCAACAAGAGAGTTGACCTTCCCTGTTGATGAA
AATGGTACAGTGAAATCTGTAATTGAATATTTTCGAGAAACATATGGGTTTGTAATTCAG
CATACCCAGTGGCCTTGTCTACAAGTTGGAAATCAGCAGAGACCTAATTACTTGCCAATG
GAAGTCTGCAAGATTGTGGAGGGACAAAGGTACTCAAAGCGCTTGAATGAGAGACAGATC
ACTGCACTTCTGAAAGTGACCTGCCAGCGTCCCCAAGAGAGGGAGCGTGATATTCTTGAG
ACCGTACATCATAACGCCTATGCTAATGACCCATATGCCAAGGAGTTTGGTATTAAGATT
AGTGACAAGTTGGCACAAGTTGAGGCTCGTATTTTGCCTCCACCTCGGCTTAAATATCAT
GATAACGGTCGAGAAAAGGACTGCCTGCCACAAGTTGGCCAATGGAATATGATGAACAAG
AAAATGGTAAATGGAGGGACGGTTAACAATTGGATCTGCATAAACTTCTCTCGCAATGTG
CAAGACAGTGTTGCACATGGGTTTTGCTCTGAGCTTGCACAAATGTGCCAGATATCTGGC
ATGAATTTCAATCCAAATCCTGTTCTGCCACCTTCGAGTGCACGCCCTGATCAGGTCGAA
AGAGTCTTGAAAACTCGATTTCATGATGCTATGACTAAGTTGCAGCCGCATGGGAGAGAG
CTTGATTTGCTAGTTGTCATCTTGCCTGACAATAATGGATCTCTTTATGGTGATCTGAAG
CGTATTTGTGAGACTGAACTAGGAGTTGTCTCACAGTGCTGTTTGACAAAACATGTATTT
AAGATGAGCAAACAGTATCTAGCCAATGTAGCGCTGAAAATCAATGTGAAGGTGGGAGGG
AGAAACACTGTGCTTGTTGATGCAATATCGAGGCGAATTCCTCTTGTCAGCGACCGGCCT
ACCATCATTTTTGGTGCAGATGTCACCCACCCTCACCCTGGGGAGGACTCTAGCCCATCC
ATTGCCGCGGTGGTTGCTTCTCAAGATTGGCCTGAGATTACAAAGTATGCTGGTCTAGTT
TCTGCTCAAGCCCATAGGCAAGAGCTTATTCAGGATCTGTACACGACTAGGCAAGATCCT
GTTAAGGGGACAGTCGCTGGTGGAATGATTAAGGACTTACTTATATCCTTCCGAAGAGCT
ACTGGACAAAAGCCTCAGAGAATCATTTTCTACAGGGATGGTGTCAGTGAGGGACAATTT
TATCAAGTGCTTCTTTTCGAACTTGATGCGATCCGCAAAGCATGTGCGTCTTTGGAGCCA
AATTATCAGCCCCCAGTTACATTTGTTGTGGTTCAGAAACGACATCACACAAGGCTTTTT
GCCAATAACCACCGTGACAGAAATGCAGTTGACAGGAGCGGGAACATTATACCCGGTACT
GTTGTAGATTCAAAGATATGCCACCCGACAGAGTTTGATTTCTATCTTTGTAGCCATGCT
GGCATACAGGGTACGAGCCGTCCAGCTCACTACCATGTTCTATGGGACGAGAACAAATTC
ACAGCAGATGCGCTGCAGTCTTTGACCAACAACCTCTGCTATACATATGCAAGGTGCACA
CGTTCCGTCTCCATCGTTCCCCCTGCATATTATGCACATTTGGCAGCTTTCCGTGCTCGA
TTTTATATGGAGCCTGAGACATCTGACGGTGGTTCAGTAACAAGTGGGGCTGCTGCTGGC
AGAGGGGGTGGTGCAGGAGCTGCTGGAAGGAACACCCGAGCCCCAGGTGCTGGTGCTGCT
GTTAGACCTCTTCCTGCGCTCAAGGATAATGTGAAGAGGGTTATGTTCTACTGCTAG

Peptide Sequence

PEP ID

XP_016446232.1
PEP Infomation

PREDICTED: protein argonaute 1-like [Nicotiana tabacum]
Sequence

MVRKRRTELPGSGESSGSQETGGQGRGQHPQLLQQQQGGYQGAQETGAQSRGQRPQQQQQ
GSYQGGGRGWRPQQGGYGGRGAGGPPRGGMAPQQSYGGMAPQQSYGGQPEYYQQGRGAQQ
HQRGGGPPQQHGGIGGRGAPSGGPSRPPAPELHQATSQTPYQAAMTTQPIPYVRPTETSS
EAGSSSQPPEQAALQVTQQFQQLALQQEAAPTQAVPPASSKSLRFPLRPGKGSNGMRCIV
KANHFFAELPDKDLHQYDVTISPEVPSRGVNRAVMAQLVKLYQESHLGKRLPAYDGRKSL
YTAGPLPFVQKDFKITLIDDEDGPGGARREREFKVVIKLAARADLHHLGMFLEGKQADAP
QEALQVLDIVLRELPTSRFCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSL
NIDMSSTAFIEPLPVINFVTQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRK
YRISGLTSQATRELTFPVDENGTVKSVIEYFRETYGFVIQHTQWPCLQVGNQQRPNYLPM
EVCKIVEGQRYSKRLNERQITALLKVTCQRPQERERDILETVHHNAYANDPYAKEFGIKI
SDKLAQVEARILPPPRLKYHDNGREKDCLPQVGQWNMMNKKMVNGGTVNNWICINFSRNV
QDSVAHGFCSELAQMCQISGMNFNPNPVLPPSSARPDQVERVLKTRFHDAMTKLQPHGRE
LDLLVVILPDNNGSLYGDLKRICETELGVVSQCCLTKHVFKMSKQYLANVALKINVKVGG
RNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLV
SAQAHRQELIQDLYTTRQDPVKGTVAGGMIKDLLISFRRATGQKPQRIIFYRDGVSEGQF
YQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHRDRNAVDRSGNIIPGT
VVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADALQSLTNNLCYTYARCT
RSVSIVPPAYYAHLAAFRARFYMEPETSDGGSVTSGAAAGRGGGAGAAGRNTRAPGAGAA
VRPLPALKDNVKRVMFYC

Transcript Sequence

Gene sequence data has not been registered.